Other
plasmid analysis
KPC plasmid clustering workflow via Nextflow starting from accessionnumbers. Workflow is only tested and intended for KPC-plasmids.
This repository was used in this work:
Brandt, C. et al. Assessing genetic diversity and similarity of 435 KPC-carrying plasmids. Scientific Reports 9, 11223 (2019) https://doi.org/10.1038/s41598-019-47758-5
However might be of interest for other resistance carrying plasmids.