Skip to content

SARS-CoV-2

SARS-CoV-2 Surveillance Thuringia

SARS-CoV-2 workflow for high throughput genome reconstruction and analysis

poreCov-An Easy to Use, Fast, and Robust Workflow for SARS-CoV-2 Genome Reconstruction via Nanopore Sequencing
Christian Brandt, Sebastian Krautwurst, Riccardo Spott, Mara Lohde, Mateusz Jundzill, Mike Marquet, Martin Hölzer
Front. Genet., 28 July 2021 | https://doi.org/10.3389/fgene.2021.711437

Molecular epidemiology of SARS-CoV-2

Molecular epidemiology of SARS-CoV-2 - a regional to global perspective
Christian Brandt, Riccardo Spott, Martin Hoelzer, Denis Kuehnert, Stephan Fuchs, Mara Lohde, Mike Marquet, Adrian Viehweger, Dagmar Rimek, Mathias Pletz
medRxiv

Other manuscripts that we were involved in

Computational Strategies to Combat COVID-19: Useful Tools to Accelerate SARS-CoV-2 and Coronavirus Research
Franziska Hufsky, Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia Arighi, Alex Bateman, Jan Baumbach, Niko Beerenwinkel, Christian Brandt, Marco Cacciabue, Sara Chuguransky, Oliver Drechsel, Robert D Finn, Adrian Fritz, Stephan Fuchs, Georges Hattab, Anne-Christin Hauschild, Dominik Heider, Marie Hoffmann, Martin Hölzer, Stefan Hoops, Lars Kaderali, Ioanna Kalvari, Max von Kleist, Renó Kmiecinski, Denise Kühnert, Gorka Lasso, Pieter Libin, Markus List, Hannah F Löchel, Maria J Martin, Roman Martin, Julian Matschinske, Alice C McHardy, Pedro Mendes, Jaina Mistry, Vincent Navratil, Eric P Nawrocki, Áine Niamh O’Toole, Nancy Ontiveros-Palacios, Anton I Petrov, Guillermo Rangel-Pineros, Nicole Redaschi, Susanne Reimering, Knut Reinert, Alejandro Reyes, Lorna Richardson, David L Robertson, Sepideh Sadegh, Joshua B Singer, Kristof Theys, Chris Upton, Marius Welzel, Lowri Williams, Manja Marz Briefings in Bioinformatics, bbaa232, https://doi.org/10.1093/bib/bbaa232

Severe clinical relapse in an immunocompromised host with persistent SARS-CoV-2 infection
Philipp A. Reuken, Andreas Stallmach, Mathias W. Pletz, Christian Brandt, Nico Andreas, Sabine Hahnfeld, Bettina Löffler, Sabine Baumgart, Thomas Kamradt, Michael Bauer
Leukemia (2021), https://doi.org/10.1038/s41375-021-01175-8

SARS-CoV-2 causes severe alveolar inflammation and barrier dysfunction
Stefanie Deinhardt-Emmer, Sarah Böttcher, Clio Häring, Liane Giebeler, Andreas Henke, Roland Zell, Franziska Hornung, Christian Brandt, Mike Marquet, Alexander S. Mosig, Mathias W. Pletz, Michael Schacke, Jürgen Rödel, Regine Heller, Sandor Nietzsche, Bettina Löffler, Christina Ehrhardt
J Virol. 2021 Feb 26;JVI.00110-21.doi: 10.1128/JVI.00110-21.